Alcian Blue Quantitation 161
3. Alcian blue stock solution (Alcian blue in 0.1% H
2
SO
4
/0.4 M guanidine-HCl ): Add 0.1
mL of 10% H
2
SO
4
to 0.5 mL of 8 M guanidine-HCl. Add H
2
O to 10 mL. Dissolve 0.1-0.2g
(depending on batch) of Alcian blue 8 GS (Wieslab, Sweden). Mix for 2 h to overnight.
Store in the dark at 4°C. The solution will be stable for for 1 mo.
The guanidine-insoluble portion of the stain is removed by centrifugation (12,000g, 15 min)
before each preparation of AB reagent. Dilute 100 µL of the supernatant to 10 mL and
read absorbance at 600 nm. The concentration of Alcian blue in the stock solution should
be adjusted, by addition of 0.4 M guanidine-HCl/0.1% H
2
SO
4
, corresponding to an absor-
bance of 1.4 of the diluted stock.
4. 8.0 M guanidine-HCl (Gu-HCl): Dissolve 764 g of guanidine-HCl p.a. (Mw 95.53) in
H
2
O and add to 1000 mL. The solution will be stable for for 1 yr at room temperature.
If technical-grade guanidine-HCl is used, it must be stirred overnight with active charcoal
and then filtered. The concentration of a guanidine-HCl may be checked by measuring
the density of the solution: 8.0 M guanidine-HCl has a density of 1.192 g/L.
5. 3.0 M MgCl
2
: Dissolve 305 g of MgCl
2
× 6H
2
O (Mw 203.30) in H
2
O and add H
2
O to
500 mL.The solution will be stable for for 1 yr at room temperature.
6. CsC calibrator stock solution (chondroitin-6-sulfate 10mg/mL): Dissolve 20 mg of chon-
droitin-6-sulfate (Sigma C4384) in 2 mL of H
2
O. The solution will be stable for several
years at –20°C.
7. TG × 10 (0.25 M Tris/1.92 M glycine pH 8.3): Dissolve 12.1 g Tris base and 57.6g of
glycine in a final volume of 400 mL of H
2
O.The pH should be approximately 8.3, but
need not be adjusted. The solution will be stable for for 1 yr at room temperature.
8. 10% (w/v) SDS: Dissolve 25 g of SDS in a final volume of 250 mL of H
2
O. The solution
will be stable for for 1 yr at room temperature.
9. 1.0M Tris-acetate, pH 7.4: Dissolve 121 g of Tris base in H
2
O. Adjust pH to 7.4 with acetic
acid. Add H
2
O to 1000 mL. The solution will be stable for for 1 yr at room temperature.
2.2. Reagents
1. SAT-reagent (0.3% H
2
SO
4
/0.75% Triton X-100): Take 0.3 mL of 10% H
2
SO
4
and 0.75 mL
of 10% Triton X-100. Add H
2
O to 10 mL. The solution will be stable for 1 wk at room
temperature.
2. AB reagent (Alcian blue in 0.1% H
2
SO
4
/0.25% Triton): Take 5.0 mL of Alcian blue stock
solution and add 1.0 mL of 10% H
2
SO
4
and 2.5 mL of 10% Triton. Add H
2
O to a final
volume of 100 mL. The solution will be stable for 1 wk at 4°C.
3. DMSO washing solution (40% (v/v) DMSO/0.05M MgCl
2
): Add 40 mL of DMSO to 40
mL of H
2
0 and add 1.7 mL of 3.0 M MgCl
2
. Add H
2
0 to 100 mL. Store at room tempera-
ture. The solution will be stable for 1 mo.
4. Ethanol washing solution (50% (v/v) ethanol/0.05M MgCl
2
): Take 52 mL of ethanol
(96%, v/v) and add 1.7 mL of 3.0 M MgCl
2
. Add H
2
O to 100 mL. Store at room tempera-
ture. The solution will be stable for 1 mo.
5. Gu-prop-H
2
O: 4 M guanidine-HCl/33% 1-propanol/0.25% Triton/0.1% Ficoll.) Take 50 mL
of 8.0 M guanidine-HCl, 33 mL of 1-propanol p.a., and 2.5 mL of 10% Triton. Add 0.1 g
of Ficoll. Mix and add H
2
O to 100 mL. Do not use 2-propanol (isopropanol)! Store at
room temperature. The solution will be stable for 1 yr.
6. Prop-gu: 71% 1-propanol/2.3 M guanidine-HCl): Mix 71 mL of 1-propanol p.a. and 29
mL of 8.0 M guanidine-HCl. Do not use 2-propanol (isopropanol)! Store at room tem-
perature. The solution will be stable for 1 yr.