2 Analytical Techniques for Atmospheric Measurement
themselves undergo further transformation. It is often the secondary products that are
most harmful to the atmosphere, and it is crucial that the model contains an accurate
description of the chemical mechanisms that describe the atmospheric degradation
of trace gases emitted into the atmosphere.
1.1.2 The importance of atmospheric chemistry
The earth’s atmosphere is oxidising not because of reaction of trace species with O
2
but owing to the presence of several key oxidising intermediates, which initiate the
atmospheric removal of trace gases in the troposphere, eventually forming CO
2
and
water vapour. The most important of these is the hydroxyl radical (OH), which is
mostly generated in the daytime as a result of ozone photolysis to form electroni-
cally excited oxygen atoms, O
1
D, which react rapidly with water vapour to form OH.
The hydroxyl radical reacts with virtually all trace gases, including CO, hydrocarbons,
oxygenated volatile organic compounds (VOCs), hydrochlorofluorocarbons (HCFCs),
used as replacements for chlorofluorocarbons (CFCs) following their ban after the
Montreal Protocol, and SO
2
. Under normal circumstances, OH concentrations are very
low at night, and the nitrate radical NO
3
replaces OH as the major oxidising species.
NO
3
is generated by the reaction of NO
2
with ozone, and reacts either by hydrogen atom
abstraction or by addition to double bonds. Ozone itself is the third major oxidising
species, reacting, for example, with unsaturated molecules through addition to double
bonds forming ozonides which decompose to form a variety of unstable intermediates.
Common to the oxidation by OH, NO
3
or O
3
is the formation of intermediate peroxy
radicals, RO
2
, where R is an organic fragment, including R = H, which reacts with nitric
oxide, emitted following the burning of fossil fuels, to form nitrogen dioxide NO
2
.NO
2
gas is brown, as a result of strong absorption of sunlight in the blue and green parts of
the spectrum, and is rapidly photolysed by sunlight < 400 nm to form ground-state
oxygen atoms, O
3
P, which almost instantaneously combine with O
2
to form O
3
, which
is harmful to humans and plants in high concentrations.
The conversion of primary emissions, such as VOCs, eventually to CO
2
and water
vapour can be extremely complex, involving several reactions. To give an example,
the Master Chemical Mechanism (Jenkin et al., 2003), http://mcm.leeds.ac.uk/MCM/,
describes the complete oxidation pathways for the top 135 VOC emissions in the UK, and
consists of 13 600 chemical species and 5900 chemical reactions. An important input to
the model is the rate coefficient for each of these reactions over a range of conditions of
temperature and pressure encountered in the atmosphere, and although many have been
measured in the laboratory, the majority are not known and have to be estimated. In
addition, solar-induced photodissociation and deposition to surfaces (the ground, ocean
or aerosols) must be included to completely describe the chemistry of the atmosphere,
and it is necessary in the laboratory to measure absorption cross-sections as a function
of wavelength and temperature, and to measure photodissociation quantum yields as a
function of wavelength, temperature and pressure.
The focus of this book is not about the chemistry in the atmosphere that is examined
via field measurements, but the techniques by which the field measurements are made.
The interested reader is referred to a number of excellent textbooks and review articles