CHAPTER 3. NUCLEAR MEDICINE SERVICES
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Other required apparatus includes a multichannel pipettor and tips,
disposable reagent reservoirs, vortex mixer, timing device, refrigerator, freezer,
graduated glassware, laboratory coats, gloves (protective, latex and powder
free), safety glasses and a biohazard container (radiation).
3.8.3.4. General workflow
In order to achieve maximum efficiency it is essential to establish a
culture of good practice in a molecular biology laboratory. Hence, there should
be no contact between the pre-amplification areas and Area 3. The considera
-
tions outlined in the following paragraph should be kept in mind.
The PCR master mix is prepared in Area 1 and added to a tray containing
tubes. It should be stored in the refrigerator until needed in the specimen
preparation area (Area 2). Specimens and controls are processed in Area 2 and
added to the tubes that are placed in the thermocycler. Products are submitted
to agarose gel electrophoresis (Area 3 — with options of Southern or dot blot,
radioactive labelling and hybridization) in the radiation area.
The strict observance of standard biosafety laboratory practices and good
laboratory protocol PCR and molecular hybridization with radionuclides
should be monitored to ensure the integrity of tests. The following rules are
applicable:
(a) Personnel should always work in one direction, from pre-PCR to post-
PCR areas, to avoid carry-over contamination from amplified products.
(b) Post-PCR should be kept as far as possible from pre-PCR, to avoid
aerosol contamination.
(c) Working surfaces in each area must be decontaminated with 0.5% sodium
hypochloride, followed by 70% ethanol before performing assay
procedures in this area.
(d) Specimens must be stored separately from reagents, to avoid contami-
nation of open reagents.
(e) When handling material containing DNA and/or RNA or amplicons, it is
essential to use a pipettor with a plugged (aerosol barrier) tip or a positive
displacement tip — post-PCR pipettors must never be used in pre-PCR
areas.
(f) To avoid possible aerosol contamination, all centrifuges should be kept at
a distance from areas where the operator is preparing the master mix and
controls and adding prepared specimens to the PCR master mix.
(g) Dry baths or dry heat blocks should be used in preference to water baths,
in order to avoid specimen contamination.