Virus-infected cells (500 ml) were harvested 72 h post-infection by centrifuga-
tion at 2000 g, washed three times in ice cold phosphate-buffered saline, trans-
ferred to microfuge tubes and pelleted at 13,000 rpm in a bench-top centrifuge. In
some cases cell pellets were stored at –80 1C until use. Cells were resuspended in
(20 ml) sonication buffer containing: 100 mM NaCl, 50 mM Tris-HCl, 10% glyc-
erol, and protease inhibitor cocktail tablets (complete mini EDTA-free, Roche,
Germany), pH 7.9. These protease inhibitors are compatible with IMAC, being
EDTA-free, and they inhibit serine and cysteine proteases, but not metallopro-
teases. Cells were sonicated at medium intensity (Vibracell, Sonics and Materials
Inc., Danbury, USA) in three, 40 s bursts, at 1 min intervals and kept on ice.
The addition of 2% NP-40 completed the lysis buffer and the cells were gently
agitated on a rocker for 30 min at 4 1C, then centrifuged at 100,000 g for 40 min
at 4 1C.
The supernatant was passed through an agarose matrix preloaded with Ni–NTA
(nitrilotriacetic acid) resin (Invitrogen, Carlsbad, USA). Solution flow through
the column was by gravity flow. Following equilibration, the column was loaded
with the solubilised protein extract in lysis buffer. Ten volumes of binding buffer
containing: 500 mM NaCl, 20 mM Tris-HCl, 5 mM imidazole, 10% glycerol, pH
7.9 were added, followed by 10 volumes of wash buffer (binding buffer containing
15 mM imidazole). Washing conditions were optimised by altering the imidazole
concentration. It was found that 15 mM imidazole was the highest concentration
at which the target protein was retained in the matrix column and much of the
non-specific protein was removed. The protein was eluted with five volumes
of elution buffer (binding buffer containing 250 mM imidazole, plus protease
inhibitor, pH 7.9). Because subsequent steps to remove detergent utilised a
binding matrix, all eluate fractions were collected. Samples of the eluate were
analysed by sodium dodecyl (lauryl) sulfate-polyacrylamide gel electrophoresis
(SDS-PAGE) and the different extraction times compared (Fig. 4). This showed
that more protein was present when the extraction time was 30 min compared
to 16 h.
SDS/tris-glycine gel electrophoresis indicated a molecular mass of 260 kDa, as
determined by Western blot analysis using anti-Pan Na
v
antibody (Alomone Labs,
Jerusalem, Israel) (Fig. 5A). The protein degraded in the elution buffer after only
12 h at 4 1C, even in the presence of protease inhibitor. However, if freshly purified
hSkM1-HT protein was reconstituted immediately into liposomes, it did not de-
grade (Fig. 5A and 5B). Since the protein was more stable when in liposomes,
hSkM1-HT protein was reconstituted immediately following purification. Under
these conditions, channel activity was still present after storage at –80 1C for 4
months. The presence of contaminating bands in the silver-stained gel (Fig. 5B)
indicated that the preparation would benefit from further purification, such as size
exclusion chromatography. However, since uninfected cells undergoing the same
procedure gave no channel activity when reconstituted, the level of purity was
considered sufficient for this application.
Detergent removal is an important issue for pBLM research, since its presence
will disturb the formation of liposomes and the stability of lipid bilayers. The
Recombinant Voltage-Gated Sodium Channels into Planar BLMs 37