138 In situ characterization of thin film growth
© Woodhead Publishing Limited, 2011
overview in this chapter. Most experiments are done in liquids, usually with
water as the solvent for proteins and other biomolecules. Common proteins
are biotin, avidin, g-globulin, ferritin, bronectin, bovine (or human) serum
albumin (BSA or HSA), and hemoglobin. Other biomaterials (molecularly
more complex) include antigen–antibody bound multilayers, enzymatic
catalysists, and enzymes (Berlind et al., 2010).
Most studies have been conducted on smooth interfaces with substrates
of crystalline silicon or various metals. Studies have also involved porous
silicon surfaces, where the pores offer an increased surface area for reaction,
with protein adsorption at the surface as well as penetration of protein into
the pores (Karlsson et al., 2005). Berlind et al. (2011) are also testing new
surfaces, such as carbon and carbon nitride, in their quest ‘for improved
materials for life science applications like biomaterials and biosensors’.
Unfortunately, the surfaces that are ideal for Se characterization are not
often used in practical application such as hip joint implants, heart valves,
and stents.
Metal surfaces present a few additional challenges as they are often rough
and/or oxidized, and their optical properties vary with both microstructure
and surface condition. A common method of addressing these issues is by
measuring the substrate prior to bio-lm interaction (preferably in liquid
solution) to determine reference optical constants for the current surface.
Gold, for instance, has no oxide which simplies analysis, but roughness
and microstructure still affect its optical constants. An interface layer can
be induced in the near-surface region of gold in response to interaction with
an adsorbed biological lm, which is speculated to be a region depleted of
free electrons (Mårtensson and Arwin, 1995; Mårtensson et al., 1995). This
region is optically modeled using an EMA layer to mix the gold and bio-lm
optical properties.
Gold easily reacts with thiols to allow systematic, fundamental scientic
studies of nominally well-oriented proteins with a wide range of chemical
species of self-assembled monolayers. Much research to date has been
dedicated to fundamental studies of substrate surface chemistry effects,
solution composition and concentration, solution pH, temperature, surface
hydrophobicity, diffusion of biomolecules from solution, competition between
multiple biomolecules simultaneously in solution, and other controllable
experimental conditions (Arwin, 2005; Berlind et al., 2008). Most of these
studies use ‘ideal biomolecules’ such as simple or common proteins.
SE measurements are perfectly suited to thin bio-lms, as the phase (D)
is very sensitive to sub-nanometer surface layers. Figure 5.38 shows an in
situ Se measurement through a liquid cell during cetyltrimethylammonium
bromide (CTAB) adsorption on a gold surface (Tiwald, 2007). CTAB was
added to the liquid solution twice during the measurement, followed each time
by multiple rinse steps. Kinetic ‘D’ data are shown for a single wavelength of